accessionVersion	accession	version	submissionId	isRevocation	submitter	groupName	groupId	submittedAtTimestamp	submittedDate	releasedAtTimestamp	releasedDate	versionStatus	versionComment	pipelineVersion	amplicon_pcr_primer_scheme	authors	bioproject_accession	biosample_accession	collection_method	coverage_10x	dehosting_method	environmental_material	environmental_site	genomic_data_type	geo_loc_latitude	geo_loc_longitude	geo_loc_name_city	geo_loc_name_country	geo_loc_name_site	geo_loc_name_state_province_territory_region	insdc_sequence_read_accession	lineage_analysis_software	lineage_barcodes_version	lineage_prevalence	lineage_prevalence_full	lineage_prevalence_plot	mean_depth	predominant_lineage	purpose_of_sampling	purpose_of_sequencing	raw_sequence_data_processing_method	sample_collected_by	sample_collection_date	sample_collection_end_date	sampling_site_id	scale_of_sampling	sequenced_by	sequenced_by_contact_email	sequenced_by_contact_name	sequencing_assay_type	sequencing_date	sequencing_instrument	specimen_sample_collector_sample_id	wastewater_system_type	water_catchment_area_human_population_measurement_value	reads	snvs	depth	lineagePrevalence
WW_000006N.1	WW_000006N	1	HW-2026-09-14	false	testuser	Wastewater test data	1	1791762595	2026-10-11	1791762673	2026-10-11	LATEST_VERSION	Test data: the metadata are fictional. The reads are from WASAP sample https://db.wasap.genspectrum.org/seq/WISE_000139B.1 of the Swiss SARS-CoV-2 wastewater surveillance, sampled in Basel on 2025-12-10.	3		Granger, Hermione; Longbottom, Neville; Lovegood, Luna			Composite sampling	0.9448	Only reads mapped to SARS-CoV-2	Wastewater	School	SNV frequencies			Hogsmeade	United Kingdom	Hogwarts Castle Drains	Hogwarts		freyja 2.0.5	10_06_2026-05-25	XFG.3: 25.1%, XFG.9.3: 9.5%, XFG.6.2: 8.6%, PQ.17.6: 7.6%, PQ.12: 6.4%, XFG.3.8: 5.5%, XFG.8: 4.8%, RE.2.2.5: 4.7%, QF.2.5: 4.1%, PQ.22: 4.1%, Other: 19.5%	XFG.3: 25.11%, XFG.9.3: 9.52%, XFG.6.2: 8.58%, PQ.17.6: 7.60%, PQ.12: 6.41%, XFG.3.8: 5.46%, XFG.8: 4.81%, RE.2.2.5: 4.67%, QF.2.5: 4.14%, PQ.22: 4.12%, XFG.3.1.9: 3.29%, XGF: 3.12%, XFG.3.26: 2.83%, PQ.10.1: 2.27%, XFG.3.8.1: 2.23%, XFG.6.2.2: 2.08%, RE.2.1.1: 1.55%, XFG.14.6: 0.98%, XFG.3.24: 0.67%, LF.7.3: 0.47%	WW_000006N.1/lineagePrevalence/WW_000006N.1.lineage_prevalence.svg	373.5	XFG.3	Wastewater pathogen surveillance	Longitudinal surveillance (repeat sampling)	Reads mapped to NC_045512.2 and primer-clipped with samtools ampliconclip (ARTIC v5.4.2), subsampled to about 50000; SNVs called with samtools mpileup and ivar variants without frequency cutoff; depth with samtools depth -a	Hogwarts Office of the Caretaker	2026-09-14		GB-HOGWARTS-CASTLE-1	Institution-level surveillance	Hogwarts Potions Laboratory	hermione.granger@hogwarts.example	Hermione Granger	Amplicon sequencing assay		Illumina MiSeq	HW-2026-09-14	Combined sewer system	1000		"[{""fileId"":""FILE_000008J"",""name"":""HW-2026-09-14.vcf.gz"",""url"":""https://wastewater.loculus.chaoran.name/seq/WW_000006N.1/snvs/HW-2026-09-14.vcf.gz""}]"	"[{""fileId"":""FILE_000009G"",""name"":""HW-2026-09-14.depth.tsv.gz"",""url"":""https://wastewater.loculus.chaoran.name/seq/WW_000006N.1/depth/HW-2026-09-14.depth.tsv.gz""}]"	"[{""fileId"":""FILE_00000Y3"",""name"":""WW_000006N.1.lineage_prevalence.tsv"",""url"":""https://wastewater.loculus.chaoran.name/seq/WW_000006N.1/lineagePrevalence/WW_000006N.1.lineage_prevalence.tsv""},{""fileId"":""FILE_00000Z1"",""name"":""WW_000006N.1.lineage_prevalence.svg"",""url"":""https://wastewater.loculus.chaoran.name/seq/WW_000006N.1/lineagePrevalence/WW_000006N.1.lineage_prevalence.svg""}]"