id	specimen_sample_collector_sample_id	sample_collection_date	sample_collected_by	purpose_of_sampling	collection_method	geo_loc_name_country	geo_loc_name_state_province_territory_region	geo_loc_name_city	geo_loc_name_site	sampling_site_id	environmental_site	environmental_material	wastewater_system_type	scale_of_sampling	water_catchment_area_human_population_measurement_value	purpose_of_sequencing	sequenced_by	sequenced_by_contact_name	sequenced_by_contact_email	authors	sequencing_instrument	sequencing_assay_type	raw_sequence_data_processing_method	dehosting_method	files.snvs	files.depth	versionComment
HW-2026-08-17	HW-2026-08-17	2026-08-17	Hogwarts Office of the Caretaker	Wastewater pathogen surveillance	Composite sampling	United Kingdom	Hogwarts	Hogsmeade	Hogwarts Castle Drains	GB-HOGWARTS-CASTLE-1	School	Wastewater	Combined sewer system	Institution-level surveillance	1000	Longitudinal surveillance (repeat sampling)	Hogwarts Potions Laboratory	Hermione Granger	hermione.granger@hogwarts.example	Granger, Hermione; Longbottom, Neville; Lovegood, Luna	Illumina MiSeq	Amplicon sequencing assay	Reads mapped to NC_045512.2 and primer-clipped with samtools ampliconclip (ARTIC v5.4.2), subsampled to about 50000; SNVs called with samtools mpileup and ivar variants without frequency cutoff; depth with samtools depth -a	Only reads mapped to SARS-CoV-2	HW-2026-08-17.vcf.gz	HW-2026-08-17.depth.tsv.gz	Test data: the metadata are fictional. The reads are from WASAP sample https://db.wasap.genspectrum.org/seq/WISE_00016T5.1 of the Swiss SARS-CoV-2 wastewater surveillance, sampled in Basel on 2025-10-24.
HW-2026-08-31	HW-2026-08-31	2026-08-31	Hogwarts Office of the Caretaker	Wastewater pathogen surveillance	Composite sampling	United Kingdom	Hogwarts	Hogsmeade	Hogwarts Castle Drains	GB-HOGWARTS-CASTLE-1	School	Wastewater	Combined sewer system	Institution-level surveillance	1000	Longitudinal surveillance (repeat sampling)	Hogwarts Potions Laboratory	Hermione Granger	hermione.granger@hogwarts.example	Granger, Hermione; Longbottom, Neville; Lovegood, Luna	Illumina MiSeq	Amplicon sequencing assay	Reads mapped to NC_045512.2 and primer-clipped with samtools ampliconclip (ARTIC v5.4.2), subsampled to about 50000; SNVs called with samtools mpileup and ivar variants without frequency cutoff; depth with samtools depth -a	Only reads mapped to SARS-CoV-2	HW-2026-08-31.vcf.gz	HW-2026-08-31.depth.tsv.gz	Test data: the metadata are fictional. The reads are from WASAP sample https://db.wasap.genspectrum.org/seq/WISE_000136H.1 of the Swiss SARS-CoV-2 wastewater surveillance, sampled in Basel on 2025-11-27.
HW-2026-09-14	HW-2026-09-14	2026-09-14	Hogwarts Office of the Caretaker	Wastewater pathogen surveillance	Composite sampling	United Kingdom	Hogwarts	Hogsmeade	Hogwarts Castle Drains	GB-HOGWARTS-CASTLE-1	School	Wastewater	Combined sewer system	Institution-level surveillance	1000	Longitudinal surveillance (repeat sampling)	Hogwarts Potions Laboratory	Hermione Granger	hermione.granger@hogwarts.example	Granger, Hermione; Longbottom, Neville; Lovegood, Luna	Illumina MiSeq	Amplicon sequencing assay	Reads mapped to NC_045512.2 and primer-clipped with samtools ampliconclip (ARTIC v5.4.2), subsampled to about 50000; SNVs called with samtools mpileup and ivar variants without frequency cutoff; depth with samtools depth -a	Only reads mapped to SARS-CoV-2	HW-2026-09-14.vcf.gz	HW-2026-09-14.depth.tsv.gz	Test data: the metadata are fictional. The reads are from WASAP sample https://db.wasap.genspectrum.org/seq/WISE_000139B.1 of the Swiss SARS-CoV-2 wastewater surveillance, sampled in Basel on 2025-12-10.
HW-2026-09-28	HW-2026-09-28	2026-09-28	Hogwarts Office of the Caretaker	Wastewater pathogen surveillance	Composite sampling	United Kingdom	Hogwarts	Hogsmeade	Hogwarts Castle Drains	GB-HOGWARTS-CASTLE-1	School	Wastewater	Combined sewer system	Institution-level surveillance	1000	Longitudinal surveillance (repeat sampling)	Hogwarts Potions Laboratory	Hermione Granger	hermione.granger@hogwarts.example	Granger, Hermione; Longbottom, Neville; Lovegood, Luna	Illumina MiSeq	Amplicon sequencing assay	Reads mapped to NC_045512.2 and primer-clipped with samtools ampliconclip (ARTIC v5.4.2), subsampled to about 50000; SNVs called with samtools mpileup and ivar variants without frequency cutoff; depth with samtools depth -a	Only reads mapped to SARS-CoV-2	HW-2026-09-28.vcf.gz	HW-2026-09-28.depth.tsv.gz	Test data: the metadata are fictional. The reads are from WASAP sample https://db.wasap.genspectrum.org/seq/WISE_00018S5.1 of the Swiss SARS-CoV-2 wastewater surveillance, sampled in Basel on 2025-12-18.